geiger: Analysis of Evolutionary Diversification

Methods for fitting macroevolutionary models to phylogenetic trees Pennell (2014) <doi:10.1093/bioinformatics/btu181>.

Version: 2.0.6.3
Depends: ape (≥ 3.0-6), R (≥ 2.15.0)
Imports: MASS, mvtnorm, subplex, deSolve (≥ 1.7), digest, Rcpp (≥ 0.11.0), coda, ncbit, colorspace, methods
LinkingTo: Rcpp
Published: 2020-01-23
Author: Luke Harmon, Matthew Pennell, Jason Weir, Chad Brock, Rich Glor, Wendell Challenger, Gene Hunt, Rich FitzJohn, Graham Slater, Joseph Brown, Josef Uyeda, and Jon Eastman
Maintainer: Luke Harmon <lukeh at uidaho.edu>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/mwpennell/geiger-v2
NeedsCompilation: yes
Citation: geiger citation info
Materials: README ChangeLog
In views: Phylogenetics
CRAN checks: geiger results

Downloads:

Reference manual: geiger.pdf
Package source: geiger_2.0.6.3.tar.gz
Windows binaries: r-devel: geiger_2.0.6.2.zip, r-devel-gcc8: geiger_2.0.6.2.zip, r-release: geiger_2.0.6.3.zip, r-oldrel: geiger_2.0.6.2.zip
OS X binaries: r-release: geiger_2.0.6.2.tgz, r-oldrel: geiger_2.0.6.2.tgz
Old sources: geiger archive

Reverse dependencies:

Reverse depends: bayou, convevol, iteRates, OUwie, surface, TreeSim, windex
Reverse imports: beautier, dispRity, evobiR, hilldiv, lefse, metricTester, ouxy, PhyInformR, phylocurve, pmc, ratematrix, RPANDA, Rphylopars, RRphylo, secsse, sensiPhy, treeplyr
Reverse suggests: BBMV, diversitree, fishtree, ouch, pcmabc, phytools, RNeXML, tracerer

Linking:

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