NEArender: Network Enrichment Analysis

Performs network enrichment analysis against functional gene sets. Benchmarks networks. Renders raw gene profile matrices of dimensionality "N genes x N samples" into the space of gene set (typically pathway) enrichment scores of dimensionality "N pathways x N samples".

Version: 1.5
Depends: R (≥ 3.0.0)
Imports: stats, utils, ROCR, graphics, parallel, hexbin, MASS, RColorBrewer
Suggests: knitr, rmarkdown, tinytex, data.table
Published: 2018-03-21
Author: Andrey Alexeyenko [aut, cph, ths], Ashwini Jeggari [aut, cre]
Maintainer: Ashwini Jeggari <ashwinipriya.jeggari at ki.se>
License: GPL-3
NeedsCompilation: no
CRAN checks: NEArender results

Downloads:

Reference manual: NEArender.pdf
Vignettes: NEArender R-package
Package source: NEArender_1.5.tar.gz
Windows binaries: r-devel: NEArender_1.5.zip, r-devel-gcc8: NEArender_1.5.zip, r-release: NEArender_1.5.zip, r-oldrel: NEArender_1.5.zip
OS X binaries: r-release: NEArender_1.5.tgz, r-oldrel: NEArender_1.5.tgz
Old sources: NEArender archive

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