FLightR: Reconstruct Animal Paths from Solar Geolocation Loggers Data

Spatio-temporal locations of an animal are computed from annotated data with a hidden Markov model via particle filter algorithm. The package is relatively robust to varying degrees of shading. The hidden Markov model is described in Movement Ecology (Rakhimberdiev et al., 2015) <doi:10.1186/s40462-015-0062-5>, general package description is in the Methods in Ecology and Evolution (Rakhimberdiev et al., 2017) <doi:10.1111/2041-210X.12765> and package accuracy assessed in the Journal of Avian Biology (Rakhimberdiev et al. 2016) <doi:10.1111/jav.00891>.

Version: 0.4.9
Depends: R (≥ 3.0.2)
Imports: bit, ggsn, ggmap, ggplot2, CircStats, circular, GeoLight, fields, maptools, methods, mgcv, nlme, parallel, raster, RcppArmadillo, rgdal, rgeos, sp, truncnorm
Suggests: covr, testthat, knitr, rmarkdown
Published: 2019-06-14
Author: Eldar Rakhimberdiev [aut, cre], Anatoly Saveliev [aut], Julia Karagicheva [aut], Simeon Lisovski [ctb]
Maintainer: Eldar Rakhimberdiev <e.rakhimberdiev at rug.nl>
BugReports: http://github.com/eldarrak/FLightR/issues
License: GPL-3
URL: https://CRAN.R-project.org/package=FLightR
NeedsCompilation: no
Citation: FLightR citation info
Materials: README
In views: SpatioTemporal, Tracking
CRAN checks: FLightR results

Downloads:

Reference manual: FLightR.pdf
Vignettes: FLightR with black-tailed godwit vignette from MEE 2017
Package source: FLightR_0.4.9.tar.gz
Windows binaries: r-devel: FLightR_0.4.9.zip, r-devel-gcc8: FLightR_0.4.9.zip, r-release: FLightR_0.4.9.zip, r-oldrel: FLightR_0.4.9.zip
OS X binaries: r-release: FLightR_0.4.9.tgz, r-oldrel: FLightR_0.4.9.tgz
Old sources: FLightR archive

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