CRAN Package Check Results for Package noisyr

Last updated on 2021-04-22 11:50:23 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.0 5.00 204.45 209.45 OK
r-devel-linux-x86_64-debian-gcc 1.0.0 3.00 149.15 152.15 OK
r-devel-linux-x86_64-fedora-clang 1.0.0 269.06 OK
r-devel-linux-x86_64-fedora-gcc 1.0.0 238.68 OK
r-devel-windows-ix86+x86_64 1.0.0 9.00 212.00 221.00 OK
r-devel-windows-x86_64-gcc10-UCRT 1.0.0 OK
r-patched-linux-x86_64 1.0.0 5.01 215.32 220.33 OK
r-patched-solaris-x86 1.0.0 408.10 OK
r-release-linux-x86_64 1.0.0 4.56 218.89 223.45 OK
r-release-macos-x86_64 1.0.0 OK
r-release-windows-ix86+x86_64 1.0.0 10.00 276.00 286.00 OK
r-oldrel-macos-x86_64 1.0.0 ERROR
r-oldrel-windows-ix86+x86_64 1.0.0 7.00 197.00 204.00 OK

Check Details

Version: 1.0.0
Check: examples
Result: ERROR
    Running examples in ‘noisyr-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: calculate_expression_profile
    > ### Title: Calculate the expression profile of a gene
    > ### Aliases: calculate_expression_profile
    >
    > ### ** Examples
    >
    > bams <- rep(system.file("extdata", "ex1.bam", package="Rsamtools", mustWork=TRUE), 2)
    > genes <- data.frame("id" = 1:2,
    + "gene_id" = c("gene1", "gene2"),
    + "seqid" = c("seq1", "seq2"),
    + "start" = 1,
    + "end" = 100)
    > profile <- calculate_expression_profile(
    + gene = genes[1,],
    + bams = bams,
    + mapq.unique = 99
    + )
    Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
     there is no package called ‘GenomeInfoDbData’
    Calls: calculate_expression_profile ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
    Execution halted
Flavor: r-oldrel-macos-x86_64