CRAN Package Check Results for Package bigstatsr

Last updated on 2020-01-25 04:46:44 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.2 250.89 219.92 470.81 OK
r-devel-linux-x86_64-debian-gcc 1.1.2 173.58 161.56 335.14 OK
r-devel-linux-x86_64-fedora-clang 1.1.2 653.54 NOTE
r-devel-linux-x86_64-fedora-gcc 1.1.2 590.66 OK
r-devel-windows-ix86+x86_64 1.1.2 659.00 543.00 1202.00 NOTE
r-devel-windows-ix86+x86_64-gcc8 1.0.1 810.00 553.00 1363.00 NOTE
r-patched-linux-x86_64 1.1.2 201.76 186.94 388.70 OK
r-patched-solaris-x86 1.1.2 518.20 ERROR
r-release-linux-x86_64 1.1.2 191.48 188.27 379.75 OK
r-release-windows-ix86+x86_64 1.1.2 477.00 397.00 874.00 NOTE
r-release-osx-x86_64 1.1.2 NOTE
r-oldrel-windows-ix86+x86_64 1.1.2 615.00 516.00 1131.00 NOTE
r-oldrel-osx-x86_64 1.1.2 NOTE

Check Details

Version: 1.1.2
Check: package dependencies
Result: NOTE
    Suggests orphaned package: ‘bigalgebra’
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.1.2
Check: installed package size
Result: NOTE
     installed size is 12.9Mb
     sub-directories of 1Mb or more:
     extdata 2.3Mb
     libs 10.0Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.0.1
Check: installed package size
Result: NOTE
     installed size is 6.1Mb
     sub-directories of 1Mb or more:
     extdata 2.3Mb
     libs 3.3Mb
Flavor: r-devel-windows-ix86+x86_64-gcc8

Version: 1.1.2
Check: examples
Result: ERROR
    Running examples in ‘bigstatsr-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: big_SVD
    > ### Title: Partial SVD
    > ### Aliases: big_SVD
    >
    > ### ** Examples
    >
    > set.seed(1)
    >
    > X <- big_attachExtdata()
    > n <- nrow(X)
    >
    > # Using only half of the data
    > ind <- sort(sample(n, n/2))
    >
    > test <- big_SVD(X, fun.scaling = big_scale(), ind.row = ind)
    
     *** caught segfault ***
    address fc0df000, cause 'invalid permissions'
    
    Traceback:
     1: incr_FBM_mat(X, add)
     2: big_increment(K, tcrossprod(tmp))
     3: big_tcrossprodSelf(X, fun.scaling = fun.scaling, ind.row = ind.row, ind.col = ind.col, block.size = block.size)
     4: DualBigPCA(X, fun.scaling, ind.row, ind.col, block.size, k)
     5: big_SVD(X, fun.scaling = big_scale(), ind.row = ind)
    An irrecoverable exception occurred. R is aborting now ...
Flavor: r-patched-solaris-x86